Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q8VDP2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Q8VDP2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q8VDP2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q8VDP2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q8VDP2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q8VDP2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.08■□□□□ 0.32
Q8VDP2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q8VDP2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.08■□□□□ 0.32
Q8VDP2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q8VDP2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Q8VDP2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q8VDP2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Q8VDP2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q8VDP2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Q8VDP2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.07■□□□□ 0.32
Q8VDP2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Q8VDP2 Gm12922-201ENSMUST00000120626 809 ntBASIC17.07■□□□□ 0.32
Q8VDP2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.07■□□□□ 0.32
Q8VDP2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Q8VDP2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.07■□□□□ 0.32
Q8VDP2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q8VDP2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Q8VDP2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.06■□□□□ 0.32
Q8VDP2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.06■□□□□ 0.32
Q8VDP2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.06■□□□□ 0.32
Q8VDP2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.06■□□□□ 0.32
Q8VDP2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q8VDP2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Q8VDP2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q8VDP2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q8VDP2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q8VDP2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Q8VDP2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Q8VDP2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q8VDP2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.05■□□□□ 0.32
Q8VDP2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Q8VDP2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q8VDP2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Q8VDP2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q8VDP2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q8VDP2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Q8VDP2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Q8VDP2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Q8VDP2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
Q8VDP2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.04■□□□□ 0.32
Q8VDP2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q8VDP2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Q8VDP2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.03■□□□□ 0.32
Q8VDP2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms