Protein–RNA interactions for Protein: Q8VCN6

Cd99, CD99 antigen, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd99Q8VCN6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd99Q8VCN6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd99Q8VCN6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd99Q8VCN6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd99Q8VCN6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd99Q8VCN6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cd99Q8VCN6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd99Q8VCN6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cd99Q8VCN6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cd99Q8VCN6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.23
Cd99Q8VCN6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Cd99Q8VCN6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cd99Q8VCN6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
Cd99Q8VCN6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Gm17661-201ENSMUST00000170317 270 ntBASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cd99Q8VCN6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Gm21559-201ENSMUST00000220638 855 ntBASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Gm8587-201ENSMUST00000076538 843 ntBASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
Cd99Q8VCN6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Gm27389-201ENSMUST00000183622 195 ntBASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd99Q8VCN6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd99Q8VCN6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms