Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup35Q8R4R6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup35Q8R4R6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup35Q8R4R6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup35Q8R4R6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup35Q8R4R6 Mir8112-201ENSMUST00000184382 131 ntBASIC14.27□□□□□ -0.13
Nup35Q8R4R6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Nup35Q8R4R6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nup35Q8R4R6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup35Q8R4R6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup35Q8R4R6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup35Q8R4R6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nup35Q8R4R6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.27□□□□□ -0.13
Nup35Q8R4R6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nup35Q8R4R6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Gm6420-201ENSMUST00000193885 723 ntBASIC14.26□□□□□ -0.13
Nup35Q8R4R6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup35Q8R4R6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup35Q8R4R6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms