Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Chmp7Q8R1T1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chmp7Q8R1T1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Chmp7Q8R1T1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Chmp7Q8R1T1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Gm35558-201ENSMUST00000222675 2219 ntBASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chmp7Q8R1T1 Idnk-204ENSMUST00000226010 1898 ntBASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Gm27704-201ENSMUST00000185094 107 ntBASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Gm29518-201ENSMUST00000190858 372 ntBASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chmp7Q8R1T1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
Chmp7Q8R1T1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Chmp7Q8R1T1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Chmp7Q8R1T1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Chmp7Q8R1T1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC22.33■■□□□ 1.17
Chmp7Q8R1T1 Gm11355-201ENSMUST00000121120 306 ntBASIC22.33■■□□□ 1.17
Chmp7Q8R1T1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Chmp7Q8R1T1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Chmp7Q8R1T1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Chmp7Q8R1T1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Chmp7Q8R1T1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Gm17808-201ENSMUST00000200859 894 ntBASIC22.31■■□□□ 1.16
Chmp7Q8R1T1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms