Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Gm12382-201ENSMUST00000122005 922 ntBASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf7Q8R0S1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf7Q8R0S1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Gm43183-201ENSMUST00000200632 547 ntBASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf7Q8R0S1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Gm20760-201ENSMUST00000179197 648 ntBASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Gm10698-201ENSMUST00000182663 604 ntBASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf7Q8R0S1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Gm15378-201ENSMUST00000121894 207 ntBASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf7Q8R0S1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atf7Q8R0S1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atf7Q8R0S1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf7Q8R0S1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.58■□□□□ 0.89
Atf7Q8R0S1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atf7Q8R0S1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atf7Q8R0S1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf7Q8R0S1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Atf7Q8R0S1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Atf7Q8R0S1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.58■□□□□ 0.89
Atf7Q8R0S1 Gm4974-201ENSMUST00000209974 875 ntBASIC20.58■□□□□ 0.89
Atf7Q8R0S1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Atf7Q8R0S1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atf7Q8R0S1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Atf7Q8R0S1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms