Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ebf4Q8K4J2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ebf4Q8K4J2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Ebf4Q8K4J2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ebf4Q8K4J2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.94■□□□□ 0.14
Ebf4Q8K4J2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.93■□□□□ 0.14
Ebf4Q8K4J2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms