Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Gm10033-202ENSMUST00000211874 928 ntBASIC10.98□□□□□ -0.65
Cystm1Q8K353 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cystm1Q8K353 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC10.97□□□□□ -0.65
Cystm1Q8K353 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cystm1Q8K353 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.96□□□□□ -0.65
Cystm1Q8K353 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Gm19430-201ENSMUST00000193847 2137 ntBASIC10.96□□□□□ -0.65
Cystm1Q8K353 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cystm1Q8K353 AA386476-201ENSMUST00000098781 1665 ntBASIC10.96□□□□□ -0.65
Cystm1Q8K353 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC10.96□□□□□ -0.65
Cystm1Q8K353 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 AV356131-201ENSMUST00000206201 750 ntBASIC10.96□□□□□ -0.65
Cystm1Q8K353 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cystm1Q8K353 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cystm1Q8K353 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Cystm1Q8K353 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cystm1Q8K353 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cystm1Q8K353 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cystm1Q8K353 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cystm1Q8K353 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cystm1Q8K353 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cystm1Q8K353 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cystm1Q8K353 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cystm1Q8K353 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms