Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Gm11927-201ENSMUST00000118472 759 ntBASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Mtag2-201ENSMUST00000058665 714 ntBASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.71■□□□□ 0.26
Hmgcs1Q8JZK9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Hmgcs1Q8JZK9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Gm5408-201ENSMUST00000197998 747 ntBASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgcs1Q8JZK9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Mir2861-201ENSMUST00000175539 82 ntBASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgcs1Q8JZK9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgcs1Q8JZK9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgcs1Q8JZK9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgcs1Q8JZK9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hmgcs1Q8JZK9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms