Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Gm16061-201ENSMUST00000122167 857 ntBASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Gm24841-201ENSMUST00000158676 357 ntBASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Gm22697-201ENSMUST00000175194 63 ntBASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim61Q8JZK6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim61Q8JZK6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.33■□□□□ 0.53
Trim61Q8JZK6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim61Q8JZK6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.33■□□□□ 0.53
Trim61Q8JZK6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim61Q8JZK6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim61Q8JZK6 Gm7638-201ENSMUST00000121348 967 ntBASIC18.33■□□□□ 0.52
Trim61Q8JZK6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim61Q8JZK6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim61Q8JZK6 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.33■□□□□ 0.52
Trim61Q8JZK6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim61Q8JZK6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim61Q8JZK6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Gm29791-202ENSMUST00000207888 369 ntBASIC18.32■□□□□ 0.52
Trim61Q8JZK6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim61Q8JZK6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Gm33142-201ENSMUST00000193913 867 ntBASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Gm7791-201ENSMUST00000219066 539 ntBASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim61Q8JZK6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.3■□□□□ 0.52
Trim61Q8JZK6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim61Q8JZK6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim61Q8JZK6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim61Q8JZK6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim61Q8JZK6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms