Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Depdc1aQ8CIG0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Gm6659-201ENSMUST00000174752 547 ntBASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Depdc1aQ8CIG0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Depdc1aQ8CIG0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Depdc1aQ8CIG0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Depdc1aQ8CIG0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Gm10013-201ENSMUST00000106074 672 ntBASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Gm13474-201ENSMUST00000122466 815 ntBASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Depdc1aQ8CIG0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Depdc1aQ8CIG0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms