Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clip4Q8CI96 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clip4Q8CI96 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clip4Q8CI96 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clip4Q8CI96 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clip4Q8CI96 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clip4Q8CI96 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.57■□□□□ 0.4
Clip4Q8CI96 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Gm5643-201ENSMUST00000117081 966 ntBASIC17.57■□□□□ 0.4
Clip4Q8CI96 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.57■□□□□ 0.4
Clip4Q8CI96 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Gm11927-201ENSMUST00000118472 759 ntBASIC17.56■□□□□ 0.4
Clip4Q8CI96 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clip4Q8CI96 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.55■□□□□ 0.4
Clip4Q8CI96 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clip4Q8CI96 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.55■□□□□ 0.4
Clip4Q8CI96 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Clip4Q8CI96 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms