Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pdlim5Q8CI51 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Pdlim5Q8CI51 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Pdlim5Q8CI51 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pdlim5Q8CI51 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim5Q8CI51 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Pdlim5Q8CI51 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim5Q8CI51 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim5Q8CI51 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim5Q8CI51 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim5Q8CI51 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim5Q8CI51 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pdlim5Q8CI51 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Mir8112-201ENSMUST00000184382 131 ntBASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Dio3-201ENSMUST00000097228 1449 ntBASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim5Q8CI51 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Mtag2-201ENSMUST00000058665 714 ntBASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Gm4968-201ENSMUST00000071458 858 ntBASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Gm10602-201ENSMUST00000098239 609 ntBASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim5Q8CI51 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Mir6349-201ENSMUST00000184059 97 ntBASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pdlim5Q8CI51 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Gm10138-203ENSMUST00000206952 366 ntBASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim5Q8CI51 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim5Q8CI51 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms