Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.27■□□□□ 0.68
PdgfcQ8CI19 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PdgfcQ8CI19 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PdgfcQ8CI19 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PdgfcQ8CI19 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PdgfcQ8CI19 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PdgfcQ8CI19 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PdgfcQ8CI19 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PdgfcQ8CI19 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Iqck-206ENSMUST00000208658 2891 ntBASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PdgfcQ8CI19 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Grk6-206ENSMUST00000224995 2971 ntBASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Gm7461-201ENSMUST00000058918 827 ntBASIC19.23■□□□□ 0.67
PdgfcQ8CI19 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfcQ8CI19 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Gm11950-201ENSMUST00000121615 838 ntBASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfcQ8CI19 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.21■□□□□ 0.67
PdgfcQ8CI19 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
PdgfcQ8CI19 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PdgfcQ8CI19 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfcQ8CI19 Actl10-202ENSMUST00000226583 1501 ntBASIC19.21■□□□□ 0.67
PdgfcQ8CI19 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfcQ8CI19 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfcQ8CI19 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfcQ8CI19 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfcQ8CI19 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms