Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rbm28Q8CGC6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rbm28Q8CGC6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rbm28Q8CGC6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rbm28Q8CGC6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rbm28Q8CGC6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rbm28Q8CGC6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rbm28Q8CGC6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Gm12085-201ENSMUST00000119263 940 ntBASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rbm28Q8CGC6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Grk6-206ENSMUST00000224995 2971 ntBASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rbm28Q8CGC6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rbm28Q8CGC6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rbm28Q8CGC6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms