Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.57■■□□□ 1.04
Smc4Q8CG47 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smc4Q8CG47 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smc4Q8CG47 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.55■■□□□ 1.04
Smc4Q8CG47 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.55■■□□□ 1.04
Smc4Q8CG47 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.55■■□□□ 1.04
Smc4Q8CG47 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.55■■□□□ 1.04
Smc4Q8CG47 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smc4Q8CG47 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smc4Q8CG47 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.53■■□□□ 1.04
Smc4Q8CG47 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Gm45058-201ENSMUST00000205810 766 ntBASIC21.53■■□□□ 1.04
Smc4Q8CG47 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smc4Q8CG47 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Mir8112-201ENSMUST00000184382 131 ntBASIC21.52■■□□□ 1.04
Smc4Q8CG47 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smc4Q8CG47 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Smc4Q8CG47 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
Smc4Q8CG47 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smc4Q8CG47 Gm9731-201ENSMUST00000209480 747 ntBASIC21.51■■□□□ 1.03
Smc4Q8CG47 Gm7791-201ENSMUST00000219066 539 ntBASIC21.51■■□□□ 1.03
Smc4Q8CG47 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms