Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccdc28bQ8CEG5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc28bQ8CEG5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.27■□□□□ 0.35
Ccdc28bQ8CEG5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc28bQ8CEG5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ccdc28bQ8CEG5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc28bQ8CEG5 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.27■□□□□ 0.35
Ccdc28bQ8CEG5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc28bQ8CEG5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc28bQ8CEG5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Gm13234-201ENSMUST00000120010 747 ntBASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc28bQ8CEG5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc28bQ8CEG5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
Ccdc28bQ8CEG5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms