Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim52Q8CDV4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Actl10-202ENSMUST00000226583 1501 ntBASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim52Q8CDV4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.64■■□□□ 1.06
Trim52Q8CDV4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Trim52Q8CDV4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim52Q8CDV4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Gm26039-201ENSMUST00000158152 144 ntBASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim52Q8CDV4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Ank2-226ENSMUST00000189368 339 ntBASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Gm29518-201ENSMUST00000190858 372 ntBASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim52Q8CDV4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Gm7284-201ENSMUST00000131667 944 ntBASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim52Q8CDV4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim52Q8CDV4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.61■■□□□ 1.05
Trim52Q8CDV4 Gm14859-201ENSMUST00000117752 357 ntBASIC21.61■■□□□ 1.05
Trim52Q8CDV4 Gm11355-201ENSMUST00000121120 306 ntBASIC21.61■■□□□ 1.05
Trim52Q8CDV4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim52Q8CDV4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.61■■□□□ 1.05
Trim52Q8CDV4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim52Q8CDV4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim52Q8CDV4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim52Q8CDV4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim52Q8CDV4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim52Q8CDV4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms