Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ufl1Q8CCJ3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Gm22697-201ENSMUST00000175194 63 ntBASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Gm18101-201ENSMUST00000215769 548 ntBASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Il3ra-202ENSMUST00000223589 738 ntBASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ufl1Q8CCJ3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ufl1Q8CCJ3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ufl1Q8CCJ3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ufl1Q8CCJ3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ufl1Q8CCJ3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Gm13474-201ENSMUST00000122466 815 ntBASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Gm17661-201ENSMUST00000170317 270 ntBASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ufl1Q8CCJ3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ufl1Q8CCJ3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms