Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf31Q8CCF0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.13■□□□□ 0.65
Prpf31Q8CCF0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf31Q8CCF0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf31Q8CCF0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf31Q8CCF0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prpf31Q8CCF0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prpf31Q8CCF0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf31Q8CCF0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf31Q8CCF0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Prpf31Q8CCF0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Gm27463-201ENSMUST00000183569 57 ntBASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf31Q8CCF0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Gm7889-201ENSMUST00000185591 958 ntBASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.09■□□□□ 0.65
Prpf31Q8CCF0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf31Q8CCF0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Prpf31Q8CCF0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Prpf31Q8CCF0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.07■□□□□ 0.64
Prpf31Q8CCF0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf31Q8CCF0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Prpf31Q8CCF0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Prpf31Q8CCF0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf31Q8CCF0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf31Q8CCF0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf31Q8CCF0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Prpf31Q8CCF0 Gm10231-201ENSMUST00000181584 441 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms