Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
E4f1Q8CCE9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.56■□□□□ 0.88
E4f1Q8CCE9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
E4f1Q8CCE9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Gm13559-201ENSMUST00000120476 863 ntBASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.54■□□□□ 0.88
E4f1Q8CCE9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Gm11539-201ENSMUST00000119837 557 ntBASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Gm13436-201ENSMUST00000120418 567 ntBASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
E4f1Q8CCE9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
E4f1Q8CCE9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
E4f1Q8CCE9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
E4f1Q8CCE9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
E4f1Q8CCE9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.52■□□□□ 0.88
E4f1Q8CCE9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
E4f1Q8CCE9 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.52■□□□□ 0.88
E4f1Q8CCE9 Odf3b-204ENSMUST00000227834 930 ntBASIC20.52■□□□□ 0.88
E4f1Q8CCE9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
E4f1Q8CCE9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
E4f1Q8CCE9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
E4f1Q8CCE9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
E4f1Q8CCE9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms