Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc46a2Q8CA03 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Nespas-201ENSMUST00000143738 1083 ntBASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc46a2Q8CA03 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Slc46a2Q8CA03 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc46a2Q8CA03 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Slc46a2Q8CA03 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Gm10418-201ENSMUST00000100943 576 ntBASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Slc46a2Q8CA03 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc46a2Q8CA03 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Slc46a2Q8CA03 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Slc46a2Q8CA03 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.77■□□□□ 0.27
Slc46a2Q8CA03 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Gm38285-201ENSMUST00000192928 922 ntBASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Slc46a2Q8CA03 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms