Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Uba3Q8C878 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Uba3Q8C878 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Uba3Q8C878 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Uba3Q8C878 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Uba3Q8C878 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.41■□□□□ 0.54
Uba3Q8C878 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Uba3Q8C878 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Uba3Q8C878 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Uba3Q8C878 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Uba3Q8C878 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Uba3Q8C878 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.4■□□□□ 0.54
Uba3Q8C878 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.4■□□□□ 0.54
Uba3Q8C878 Gm715-201ENSMUST00000117865 831 ntBASIC18.4■□□□□ 0.54
Uba3Q8C878 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Uba3Q8C878 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Uba3Q8C878 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Uba3Q8C878 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.39■□□□□ 0.53
Uba3Q8C878 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.39■□□□□ 0.53
Uba3Q8C878 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Gm4974-201ENSMUST00000209974 875 ntBASIC18.39■□□□□ 0.53
Uba3Q8C878 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Uba3Q8C878 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Uba3Q8C878 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.39■□□□□ 0.53
Uba3Q8C878 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Uba3Q8C878 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.39■□□□□ 0.53
Uba3Q8C878 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Uba3Q8C878 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Uba3Q8C878 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Uba3Q8C878 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.38■□□□□ 0.53
Uba3Q8C878 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.38■□□□□ 0.53
Uba3Q8C878 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.38■□□□□ 0.53
Uba3Q8C878 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Mir8112-201ENSMUST00000184382 131 ntBASIC18.38■□□□□ 0.53
Uba3Q8C878 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.38■□□□□ 0.53
Uba3Q8C878 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.38■□□□□ 0.53
Uba3Q8C878 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Uba3Q8C878 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Uba3Q8C878 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Uba3Q8C878 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.38■□□□□ 0.53
Uba3Q8C878 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Uba3Q8C878 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Uba3Q8C878 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.37■□□□□ 0.53
Uba3Q8C878 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.37■□□□□ 0.53
Uba3Q8C878 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.37■□□□□ 0.53
Uba3Q8C878 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.37■□□□□ 0.53
Uba3Q8C878 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Uba3Q8C878 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Uba3Q8C878 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Uba3Q8C878 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.37■□□□□ 0.53
Uba3Q8C878 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.36■□□□□ 0.53
Uba3Q8C878 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Uba3Q8C878 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Uba3Q8C878 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.36■□□□□ 0.53
Uba3Q8C878 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.36■□□□□ 0.53
Uba3Q8C878 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Uba3Q8C878 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Uba3Q8C878 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Uba3Q8C878 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms