Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp20Q8C6M1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.3■□□□□ 0.68
Usp20Q8C6M1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Gm7638-201ENSMUST00000121348 967 ntBASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp20Q8C6M1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Gm24841-201ENSMUST00000158676 357 ntBASIC19.28■□□□□ 0.68
Usp20Q8C6M1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp20Q8C6M1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.28■□□□□ 0.68
Usp20Q8C6M1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Gm7791-201ENSMUST00000219066 539 ntBASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp20Q8C6M1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Usp20Q8C6M1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp20Q8C6M1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp20Q8C6M1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Gm6345-202ENSMUST00000180900 204 ntBASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Gm29791-202ENSMUST00000207888 369 ntBASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp20Q8C6M1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp20Q8C6M1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms