Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.56■□□□□ 0.56
Fam78aQ8C552 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Fam78aQ8C552 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fam78aQ8C552 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fam78aQ8C552 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Fam78aQ8C552 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fam78aQ8C552 Gm9013-201ENSMUST00000132939 882 ntBASIC18.55■□□□□ 0.56
Fam78aQ8C552 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.55■□□□□ 0.56
Fam78aQ8C552 Gm29518-201ENSMUST00000190858 372 ntBASIC18.55■□□□□ 0.56
Fam78aQ8C552 Gm10566-201ENSMUST00000086739 996 ntBASIC18.55■□□□□ 0.56
Fam78aQ8C552 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Fam78aQ8C552 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fam78aQ8C552 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Fam78aQ8C552 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Gm27704-201ENSMUST00000185094 107 ntBASIC18.54■□□□□ 0.56
Fam78aQ8C552 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam78aQ8C552 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.54■□□□□ 0.56
Fam78aQ8C552 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam78aQ8C552 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.53■□□□□ 0.56
Fam78aQ8C552 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Fam78aQ8C552 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Fam78aQ8C552 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam78aQ8C552 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Fam78aQ8C552 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Fam78aQ8C552 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Fam78aQ8C552 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.52■□□□□ 0.55
Fam78aQ8C552 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Fam78aQ8C552 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam78aQ8C552 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Fam78aQ8C552 Grk6-206ENSMUST00000224995 2971 ntBASIC18.51■□□□□ 0.55
Fam78aQ8C552 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam78aQ8C552 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.51■□□□□ 0.55
Fam78aQ8C552 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam78aQ8C552 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam78aQ8C552 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam78aQ8C552 Iqck-206ENSMUST00000208658 2891 ntBASIC18.51■□□□□ 0.55
Fam78aQ8C552 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam78aQ8C552 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Fam78aQ8C552 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam78aQ8C552 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Gm11355-201ENSMUST00000121120 306 ntBASIC18.5■□□□□ 0.55
Fam78aQ8C552 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Gm26039-201ENSMUST00000158152 144 ntBASIC18.5■□□□□ 0.55
Fam78aQ8C552 Gm17808-201ENSMUST00000200859 894 ntBASIC18.5■□□□□ 0.55
Fam78aQ8C552 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Fam78aQ8C552 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms