Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Eri3Q8C460 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Eri3Q8C460 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.62■□□□□ 0.25
Eri3Q8C460 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Eri3Q8C460 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Eri3Q8C460 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Eri3Q8C460 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Eri3Q8C460 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Eri3Q8C460 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.62■□□□□ 0.25
Eri3Q8C460 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.61■□□□□ 0.25
Eri3Q8C460 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.61■□□□□ 0.25
Eri3Q8C460 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Eri3Q8C460 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Eri3Q8C460 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Eri3Q8C460 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Eri3Q8C460 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.61■□□□□ 0.25
Eri3Q8C460 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Eri3Q8C460 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.61■□□□□ 0.25
Eri3Q8C460 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Eri3Q8C460 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.61■□□□□ 0.25
Eri3Q8C460 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Eri3Q8C460 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Eri3Q8C460 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.61■□□□□ 0.25
Eri3Q8C460 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.61■□□□□ 0.25
Eri3Q8C460 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Eri3Q8C460 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.6■□□□□ 0.25
Eri3Q8C460 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Eri3Q8C460 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Gm10812-201ENSMUST00000099864 546 ntBASIC16.6■□□□□ 0.25
Eri3Q8C460 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.6■□□□□ 0.25
Eri3Q8C460 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.6■□□□□ 0.25
Eri3Q8C460 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Eri3Q8C460 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Eri3Q8C460 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Eri3Q8C460 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.59■□□□□ 0.25
Eri3Q8C460 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Eri3Q8C460 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.59■□□□□ 0.25
Eri3Q8C460 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Eri3Q8C460 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.59■□□□□ 0.25
Eri3Q8C460 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.59■□□□□ 0.25
Eri3Q8C460 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Eri3Q8C460 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Eri3Q8C460 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Eri3Q8C460 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.58■□□□□ 0.24
Eri3Q8C460 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Eri3Q8C460 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Eri3Q8C460 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.58■□□□□ 0.24
Eri3Q8C460 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.58■□□□□ 0.24
Eri3Q8C460 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Eri3Q8C460 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Eri3Q8C460 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.57■□□□□ 0.24
Eri3Q8C460 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.57■□□□□ 0.24
Eri3Q8C460 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Eri3Q8C460 Mir8112-201ENSMUST00000184382 131 ntBASIC16.57■□□□□ 0.24
Eri3Q8C460 Gm8969-201ENSMUST00000199694 526 ntBASIC16.57■□□□□ 0.24
Eri3Q8C460 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.57■□□□□ 0.24
Eri3Q8C460 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms