Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ptcd1Q8C2E4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd1Q8C2E4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Fst-202ENSMUST00000223640 2612 ntBASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Mir1668-201ENSMUST00000184114 107 ntBASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Gm7370-201ENSMUST00000219471 767 ntBASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Tgds-204ENSMUST00000228543 1594 ntBASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd1Q8C2E4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.47■■□□□ 1.03
Ptcd1Q8C2E4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd1Q8C2E4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd1Q8C2E4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd1Q8C2E4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd1Q8C2E4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd1Q8C2E4 Gm18958-201ENSMUST00000174258 762 ntBASIC21.44■■□□□ 1.02
Ptcd1Q8C2E4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC21.44■■□□□ 1.02
Ptcd1Q8C2E4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.44■■□□□ 1.02
Ptcd1Q8C2E4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd1Q8C2E4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd1Q8C2E4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ptcd1Q8C2E4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.42■■□□□ 1.02
Ptcd1Q8C2E4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms