Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3rf2Q8BZT2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Gm16061-201ENSMUST00000122167 857 ntBASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Gm23634-201ENSMUST00000175071 91 ntBASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Sh3rf2Q8BZT2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3rf2Q8BZT2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Gm18101-201ENSMUST00000215769 548 ntBASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3rf2Q8BZT2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Gm22697-201ENSMUST00000175194 63 ntBASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3rf2Q8BZT2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Sh3rf2Q8BZT2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Gm13474-201ENSMUST00000122466 815 ntBASIC17.67■□□□□ 0.42
Sh3rf2Q8BZT2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms