Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trerf1Q8BXJ2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Flg-201ENSMUST00000050758 1488 ntBASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trerf1Q8BXJ2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Gm13168-201ENSMUST00000121771 632 ntBASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Gm22240-201ENSMUST00000175225 82 ntBASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trerf1Q8BXJ2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Gm11927-201ENSMUST00000118472 759 ntBASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trerf1Q8BXJ2 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Zfp783-201ENSMUST00000095946 670 ntBASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trerf1Q8BXJ2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trerf1Q8BXJ2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trerf1Q8BXJ2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trerf1Q8BXJ2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.33■□□□□ 0.53
Trerf1Q8BXJ2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trerf1Q8BXJ2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trerf1Q8BXJ2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trerf1Q8BXJ2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trerf1Q8BXJ2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trerf1Q8BXJ2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trerf1Q8BXJ2 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms