Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Il3ra-202ENSMUST00000223589 738 ntBASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc43a1Q8BSM7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc43a1Q8BSM7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Iqck-206ENSMUST00000208658 2891 ntBASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Slc43a1Q8BSM7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Slc43a1Q8BSM7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Fst-202ENSMUST00000223640 2612 ntBASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Gm6345-202ENSMUST00000180900 204 ntBASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Gm27389-201ENSMUST00000183622 195 ntBASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc43a1Q8BSM7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc43a1Q8BSM7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slc43a1Q8BSM7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc43a1Q8BSM7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc43a1Q8BSM7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slc43a1Q8BSM7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms