Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trpa1Q8BLA8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpa1Q8BLA8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trpa1Q8BLA8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpa1Q8BLA8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpa1Q8BLA8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trpa1Q8BLA8 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.33■□□□□ 0.53
Trpa1Q8BLA8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpa1Q8BLA8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpa1Q8BLA8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trpa1Q8BLA8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Gm43183-201ENSMUST00000200632 547 ntBASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpa1Q8BLA8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Mir6349-201ENSMUST00000184059 97 ntBASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpa1Q8BLA8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpa1Q8BLA8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Gm37292-201ENSMUST00000192062 758 ntBASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpa1Q8BLA8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpa1Q8BLA8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms