Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.74■□□□□ 0.59
Nop53Q8BK35 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nop53Q8BK35 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nop53Q8BK35 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nop53Q8BK35 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nop53Q8BK35 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nop53Q8BK35 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.71■□□□□ 0.59
Nop53Q8BK35 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nop53Q8BK35 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nop53Q8BK35 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nop53Q8BK35 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.7■□□□□ 0.58
Nop53Q8BK35 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Gm6211-202ENSMUST00000167849 925 ntBASIC18.7■□□□□ 0.58
Nop53Q8BK35 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nop53Q8BK35 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.69■□□□□ 0.58
Nop53Q8BK35 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nop53Q8BK35 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nop53Q8BK35 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Nop53Q8BK35 Gm2399-201ENSMUST00000104944 225 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms