Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Gm11249-201ENSMUST00000117071 859 ntBASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clrn3Q8BHH8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Gm18666-201ENSMUST00000190039 958 ntBASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clrn3Q8BHH8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.37■□□□□ 0.21
Clrn3Q8BHH8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Gm12527-201ENSMUST00000117967 564 ntBASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Trmt13-210ENSMUST00000198454 880 ntBASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clrn3Q8BHH8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Gm37856-201ENSMUST00000191634 999 ntBASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Clrn3Q8BHH8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clrn3Q8BHH8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms