Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim50Q810I2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim50Q810I2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim50Q810I2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim50Q810I2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim50Q810I2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim50Q810I2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim50Q810I2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim50Q810I2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Gm42545-201ENSMUST00000202755 922 ntBASIC17.04■□□□□ 0.32
Trim50Q810I2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim50Q810I2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim50Q810I2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim50Q810I2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim50Q810I2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim50Q810I2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Trim50Q810I2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim50Q810I2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim50Q810I2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim50Q810I2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.03■□□□□ 0.32
Trim50Q810I2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim50Q810I2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim50Q810I2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim50Q810I2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim50Q810I2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim50Q810I2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim50Q810I2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim50Q810I2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim50Q810I2 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.02■□□□□ 0.32
Trim50Q810I2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim50Q810I2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim50Q810I2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trim50Q810I2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim50Q810I2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim50Q810I2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim50Q810I2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.01■□□□□ 0.31
Trim50Q810I2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Gm13168-201ENSMUST00000121771 632 ntBASIC17.01■□□□□ 0.31
Trim50Q810I2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Gm10698-201ENSMUST00000182663 604 ntBASIC17.01■□□□□ 0.31
Trim50Q810I2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim50Q810I2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim50Q810I2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim50Q810I2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim50Q810I2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim50Q810I2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17■□□□□ 0.31
Trim50Q810I2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17■□□□□ 0.31
Trim50Q810I2 Gm37292-201ENSMUST00000192062 758 ntBASIC17■□□□□ 0.31
Trim50Q810I2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim50Q810I2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim50Q810I2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim50Q810I2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms