Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Gm28033-201ENSMUST00000184224 96 ntBASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp6nlQ80XC3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Gm11355-201ENSMUST00000121120 306 ntBASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp6nlQ80XC3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Usp6nlQ80XC3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp6nlQ80XC3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Usp6nlQ80XC3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Gm17807-201ENSMUST00000186869 298 ntBASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Gm10566-201ENSMUST00000086739 996 ntBASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp6nlQ80XC3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp6nlQ80XC3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp6nlQ80XC3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms