Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vrk1Q80X41 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Tgds-204ENSMUST00000228543 1594 ntBASIC16.65■□□□□ 0.26
Vrk1Q80X41 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.65■□□□□ 0.26
Vrk1Q80X41 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vrk1Q80X41 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vrk1Q80X41 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.64■□□□□ 0.25
Vrk1Q80X41 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Gm13401-201ENSMUST00000117074 291 ntBASIC16.64■□□□□ 0.25
Vrk1Q80X41 Gm7638-201ENSMUST00000121348 967 ntBASIC16.64■□□□□ 0.25
Vrk1Q80X41 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Gm24841-201ENSMUST00000158676 357 ntBASIC16.64■□□□□ 0.25
Vrk1Q80X41 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Gm33142-201ENSMUST00000193913 867 ntBASIC16.64■□□□□ 0.25
Vrk1Q80X41 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vrk1Q80X41 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Gm16061-201ENSMUST00000122167 857 ntBASIC16.63■□□□□ 0.25
Vrk1Q80X41 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
Vrk1Q80X41 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.63■□□□□ 0.25
Vrk1Q80X41 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.63■□□□□ 0.25
Vrk1Q80X41 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vrk1Q80X41 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Gm7791-201ENSMUST00000219066 539 ntBASIC16.62■□□□□ 0.25
Vrk1Q80X41 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.62■□□□□ 0.25
Vrk1Q80X41 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vrk1Q80X41 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms