Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Prpf40bQ80W14 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40bQ80W14 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40bQ80W14 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40bQ80W14 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.14■□□□□ 0.81
Prpf40bQ80W14 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40bQ80W14 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40bQ80W14 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40bQ80W14 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Prpf40bQ80W14 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf40bQ80W14 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Gm38285-201ENSMUST00000192928 922 ntBASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf40bQ80W14 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Gm25016-201ENSMUST00000158399 131 ntBASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Prpf40bQ80W14 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Gm12085-201ENSMUST00000119263 940 ntBASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Gm2274-201ENSMUST00000184539 609 ntBASIC20.11■□□□□ 0.81
Prpf40bQ80W14 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf40bQ80W14 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Mir6349-201ENSMUST00000184059 97 ntBASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Prpf40bQ80W14 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Gm44771-201ENSMUST00000206975 626 ntBASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Prpf40bQ80W14 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40bQ80W14 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40bQ80W14 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Prpf40bQ80W14 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40bQ80W14 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40bQ80W14 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.08■□□□□ 0.81
Prpf40bQ80W14 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40bQ80W14 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf40bQ80W14 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms