Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rpp38Q80UU2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp38Q80UU2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rpp38Q80UU2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp38Q80UU2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Mir1199-201ENSMUST00000117015 119 ntBASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rpp38Q80UU2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp38Q80UU2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpp38Q80UU2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpp38Q80UU2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rpp38Q80UU2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rpp38Q80UU2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpp38Q80UU2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms