Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ush1gQ80T11 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.1■□□□□ 0.65
Ush1gQ80T11 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ush1gQ80T11 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ush1gQ80T11 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.08■□□□□ 0.65
Ush1gQ80T11 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ush1gQ80T11 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Gm22697-201ENSMUST00000175194 63 ntBASIC19.08■□□□□ 0.64
Ush1gQ80T11 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ush1gQ80T11 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ush1gQ80T11 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Gm25016-201ENSMUST00000158399 131 ntBASIC19.07■□□□□ 0.64
Ush1gQ80T11 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ush1gQ80T11 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ush1gQ80T11 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms