Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Gm18666-201ENSMUST00000190039 958 ntBASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Gm44487-201ENSMUST00000205145 325 ntBASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim46Q7TNM2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trim46Q7TNM2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Trmt13-210ENSMUST00000198454 880 ntBASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.39■□□□□ 0.21
Trim46Q7TNM2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim46Q7TNM2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Gm6576-201ENSMUST00000169678 883 ntBASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Gm29257-201ENSMUST00000186115 639 ntBASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Gm18025-201ENSMUST00000221733 862 ntBASIC16.38■□□□□ 0.21
Trim46Q7TNM2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim46Q7TNM2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim46Q7TNM2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.36■□□□□ 0.21
Trim46Q7TNM2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim46Q7TNM2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim46Q7TNM2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim46Q7TNM2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms