Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf139Q7TMV1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf139Q7TMV1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf139Q7TMV1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Gm24841-201ENSMUST00000158676 357 ntBASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf139Q7TMV1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf139Q7TMV1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.65■□□□□ 0.58
Rnf139Q7TMV1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf139Q7TMV1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf139Q7TMV1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.64■□□□□ 0.58
Rnf139Q7TMV1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.64■□□□□ 0.58
Rnf139Q7TMV1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rnf139Q7TMV1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Gm12085-201ENSMUST00000119263 940 ntBASIC18.64■□□□□ 0.57
Rnf139Q7TMV1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms