Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kdm1aQ6ZQ88 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kdm1aQ6ZQ88 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Kdm1aQ6ZQ88 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Gm11249-201ENSMUST00000117071 859 ntBASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Gm13401-201ENSMUST00000117074 291 ntBASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Kdm1aQ6ZQ88 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.33■□□□□ 0.69
Kdm1aQ6ZQ88 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Gm15375-201ENSMUST00000119510 849 ntBASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Gm11643-201ENSMUST00000119578 864 ntBASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Kdm1aQ6ZQ88 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Kdm1aQ6ZQ88 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.31■□□□□ 0.68
Kdm1aQ6ZQ88 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Kdm1aQ6ZQ88 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms