Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Mzt1-203ENSMUST00000227948 952 ntBASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx55Q6ZPL9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx55Q6ZPL9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx55Q6ZPL9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx55Q6ZPL9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Gm15794-201ENSMUST00000120182 631 ntBASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Birc2-201ENSMUST00000054878 378 ntBASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx55Q6ZPL9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx55Q6ZPL9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms