Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Gm24841-201ENSMUST00000158676 357 ntBASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Gm18032-201ENSMUST00000222541 538 ntBASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Npc1l1Q6T3U4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Npc1l1Q6T3U4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Gm45058-201ENSMUST00000205810 766 ntBASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Npc1l1Q6T3U4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Gm10013-201ENSMUST00000106074 672 ntBASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Npc1l1Q6T3U4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Npc1l1Q6T3U4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Gm6345-202ENSMUST00000180900 204 ntBASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Npc1l1Q6T3U4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1l1Q6T3U4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1l1Q6T3U4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1l1Q6T3U4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1l1Q6T3U4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Npc1l1Q6T3U4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Npc1l1Q6T3U4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Npc1l1Q6T3U4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms