Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clca4aQ6Q473 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clca4aQ6Q473 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clca4aQ6Q473 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.85■□□□□ 0.77
Clca4aQ6Q473 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clca4aQ6Q473 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clca4aQ6Q473 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Il3ra-202ENSMUST00000223589 738 ntBASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clca4aQ6Q473 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Gm18959-201ENSMUST00000208954 655 ntBASIC19.83■□□□□ 0.77
Clca4aQ6Q473 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clca4aQ6Q473 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clca4aQ6Q473 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clca4aQ6Q473 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clca4aQ6Q473 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clca4aQ6Q473 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clca4aQ6Q473 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Gm17661-201ENSMUST00000170317 270 ntBASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Gm2274-201ENSMUST00000184539 609 ntBASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clca4aQ6Q473 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Gm45058-201ENSMUST00000205810 766 ntBASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clca4aQ6Q473 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca4aQ6Q473 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca4aQ6Q473 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 Gm7370-201ENSMUST00000219471 767 ntBASIC19.78■□□□□ 0.76
Clca4aQ6Q473 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca4aQ6Q473 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.77■□□□□ 0.76
Clca4aQ6Q473 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms