Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.72□□□□□ -0.05
Rif1Q6PR54 Chchd1-203ENSMUST00000224633 557 ntBASIC14.72□□□□□ -0.05
Rif1Q6PR54 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.71□□□□□ -0.05
Rif1Q6PR54 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rif1Q6PR54 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rif1Q6PR54 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rif1Q6PR54 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rif1Q6PR54 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rif1Q6PR54 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rif1Q6PR54 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Rif1Q6PR54 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.71□□□□□ -0.06
Rif1Q6PR54 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rif1Q6PR54 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rif1Q6PR54 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Mir770-201ENSMUST00000103252 94 ntBASIC14.7□□□□□ -0.06
Rif1Q6PR54 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.7□□□□□ -0.06
Rif1Q6PR54 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.7□□□□□ -0.06
Rif1Q6PR54 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.7□□□□□ -0.06
Rif1Q6PR54 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.7□□□□□ -0.06
Rif1Q6PR54 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rif1Q6PR54 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Mir2861-201ENSMUST00000175539 82 ntBASIC14.69□□□□□ -0.06
Rif1Q6PR54 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rif1Q6PR54 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.68□□□□□ -0.06
Rif1Q6PR54 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.68□□□□□ -0.06
Rif1Q6PR54 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rif1Q6PR54 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.67□□□□□ -0.06
Rif1Q6PR54 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms