Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smarcc2Q6PDG5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Gm11643-201ENSMUST00000119578 864 ntBASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarcc2Q6PDG5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Gm10252-201ENSMUST00000209541 832 ntBASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarcc2Q6PDG5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smarcc2Q6PDG5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Gm6576-201ENSMUST00000169678 883 ntBASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smarcc2Q6PDG5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Gm18025-201ENSMUST00000221733 862 ntBASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarcc2Q6PDG5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.33■□□□□ 0.84
Smarcc2Q6PDG5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms