Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Usp50Q6P8X6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp50Q6P8X6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp50Q6P8X6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp50Q6P8X6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Gm7791-201ENSMUST00000219066 539 ntBASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Usp50Q6P8X6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.13■□□□□ 0.81
Usp50Q6P8X6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp50Q6P8X6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp50Q6P8X6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Gm27463-201ENSMUST00000183569 57 ntBASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp50Q6P8X6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp50Q6P8X6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Usp50Q6P8X6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp50Q6P8X6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp50Q6P8X6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.1■□□□□ 0.81
Usp50Q6P8X6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.1■□□□□ 0.81
Usp50Q6P8X6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.1■□□□□ 0.81
Usp50Q6P8X6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp50Q6P8X6 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.1■□□□□ 0.81
Usp50Q6P8X6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms