Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hmgb4Q6P8W9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgb4Q6P8W9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgb4Q6P8W9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hmgb4Q6P8W9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.29■□□□□ 0.52
Hmgb4Q6P8W9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgb4Q6P8W9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgb4Q6P8W9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgb4Q6P8W9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgb4Q6P8W9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Gm12085-201ENSMUST00000119263 940 ntBASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Mir2861-201ENSMUST00000175539 82 ntBASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgb4Q6P8W9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hmgb4Q6P8W9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hmgb4Q6P8W9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hmgb4Q6P8W9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgb4Q6P8W9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgb4Q6P8W9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgb4Q6P8W9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Gm10517-202ENSMUST00000192970 758 ntBASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.23■□□□□ 0.51
Hmgb4Q6P8W9 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms