Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Abcf1Q6P542 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.57■□□□□ 0.72
Abcf1Q6P542 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.57■□□□□ 0.72
Abcf1Q6P542 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Gm4968-201ENSMUST00000071458 858 ntBASIC19.57■□□□□ 0.72
Abcf1Q6P542 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Abcf1Q6P542 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Abcf1Q6P542 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.56■□□□□ 0.72
Abcf1Q6P542 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abcf1Q6P542 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.56■□□□□ 0.72
Abcf1Q6P542 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abcf1Q6P542 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Abcf1Q6P542 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abcf1Q6P542 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Abcf1Q6P542 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Abcf1Q6P542 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Abcf1Q6P542 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Abcf1Q6P542 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.53■□□□□ 0.72
Abcf1Q6P542 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Abcf1Q6P542 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.52■□□□□ 0.72
Abcf1Q6P542 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.52■□□□□ 0.72
Abcf1Q6P542 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Abcf1Q6P542 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.52■□□□□ 0.72
Abcf1Q6P542 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abcf1Q6P542 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abcf1Q6P542 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abcf1Q6P542 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abcf1Q6P542 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Abcf1Q6P542 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.51■□□□□ 0.71
Abcf1Q6P542 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Abcf1Q6P542 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms