Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Gm43183-201ENSMUST00000200632 547 ntBASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Gm10698-201ENSMUST00000182663 604 ntBASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac4Q6NZM9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac4Q6NZM9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Gm4974-201ENSMUST00000209974 875 ntBASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac4Q6NZM9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hdac4Q6NZM9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Hdac4Q6NZM9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hdac4Q6NZM9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hdac4Q6NZM9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hdac4Q6NZM9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Gm15378-201ENSMUST00000121894 207 ntBASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Gm20760-201ENSMUST00000179197 648 ntBASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Gm10517-202ENSMUST00000192970 758 ntBASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac4Q6NZM9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Hdac4Q6NZM9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms